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Teaching - Course details


Title G2: Transcription Regulation and Gene Expression in Eukaryotes (#13709)
Location: University of Basel, Graduate School Cycle G2 #13709 Schedule FS 2018
Biozentrum, Room 106
Wednesday, 16:15 - 18:00 h (starts February 28, 2018)
Important: Read the information
Coordinator: P. Matthias
 
Program
Feb 24, 2016 Roger G. Clerc: General introduction to the course
Patrick Matthias: Gene expression analysis by transcriptomics

17:15 Invited guest, Martin Ebeling, Bioinformatics Roche, Basel: Systematic discovery of transcriptional regulatory motifs: elements of comparative genomics
Papers: Download
Lecture handouts: Download
Mar 02, 2016 Paper presentations by students
17:15 Roger G. Clerc: DNA dependent RNA polymerases (The basics of transcription I)
Papers: Download
Lecture handouts: Download
Mar 09, 2016 Paper presentations by students
17:15 Patrick Matthias: General transcription factors, TAFs, etc? (The basics of transcription II)
Papers: Download
Mar 16, 2016 Paper presentations by students
17:15 Roger G. Clerc: Modular structure of upstream transcription factors
Lecture handouts: Download
Mar 23, 2016 EASTER BREAK (March 21 - 28, 2016)
Mar 30, 2016 Paper presentations by students
17:15 Patrick Matthias: Coactivators/corepressors: general (CBP, PCAF, N-CoR, SMART, etc.) and specific (OBF-1, Bcl3, etc.)
Papers: Download
Apr 06, 2016 Paper presentations by students
17:15 Roger G. Clerc: Regulatory mechanisms of transcription factor function
Lecture handouts: Download
Apr 13, 2016 Paper presentations by students
17:15 Patrick Matthias: Epigenetic control, DNA methylation, etc.
Papers: Download
Apr 20, 2016 Paper presentations by students
17:15 Patrick Matthias: Acetylation and deacetylation
Papers: Download
Lecture handouts: Download
Apr 27, 2016 Paper presentations by students
17:15 Roger G. Clerc: Nuclear hormone receptors
Lecture handouts: Download
May 04, 2016 Paper presentations by students
17:15 Roger G. Clerc: Circadian signaling networks
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Lecture handouts: Download
May 11, 2016 Paper presentations by students
17:15 Invited guest, Joerg Betschinger: Pioneer TF factors in stem cell differentiation
Papers: Download
Lecture handouts: Download
May 18, 2016 Paper presentations by students
17:15 Patrick Matthias: Additional levels of regulation: Gene localization, olfactory receptor genes, etc.
Papers: Download
May 25, 2016 Paper presentations by students
17:15 Invited guest, Luca Giorgetti: Chromosome conformation capture, topologically associated domains (eg. enhancer - promoters)
Lecture handouts: Download
Jun 01, 2016 Paper presentations by students
17:15 Wrap-up and general review of lecture
Papers: Download
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