claim

Publications


Lee HJ, Smallwood SA Genome-Wide Analysis of DNA Methylation in Single Cells Using a Post-bisulfite Adapter Tagging Approach Methods Mol Biol. 2018 Jan; 1712:87-95

Peat JR, Smallwood SA Low Input Whole-Genome Bisulfite Sequencing Using a Post-Bisulfite Adapter Tagging Approach Methods Mol Biol. 2018 Jan; 1708:161-169

Britschgi A, Duss S, Kim S, Couto JP, Brinkhaus H, Koren S, De Silva D, Mertz KD, Kaup D, Varga Z, Voshol H, Vissieres A, Leroy C, Roloff T, Stadler MB, Scheel CH, Miraglia LJ, Orth AP, Bonamy GM, Reddy VA, Bentires-Alj M The Hippo kinases LATS1 and 2 control human breast cell fate via crosstalk with ERa Nature. 2017 Jan; 541(7638):541-545

Koren S, Reavie L, do Couto JP, De Silva D, Stadler MB, Roloff T, Britschgi A, Eichlisberger T, Kohler H, Aina O, Cardiff RD, Bentires-Alj M PIK3CAH1047R induces multipotency and multi-lineage mammary tumours Nature. 2015 Sep; 525(7567):114-8

Krebs A, Dessus-Babus S, Burger L, Schübeler D High-throughput engineering of a mammalian genome reveals building principles of methylation states at CG rich regions Elife. 2014 Sep; 3

Duss S, Brinkhaus H, Britschgi A, Cabuy E, Frey DM, Schaefer DJ, Bentires-Alj M Mesenchymal precursor cells maintain the differentiation and proliferation potentials of breast epithelial cells Breast Cancer Res. 2014 Jun; 16 (3):R60

Gaidatzis D, Burger L, Murr R, Lerch A, Dessus-Babus S, Schübeler D, Stadler MB DNA sequence explains seemingly disordered methylation levels in partially methylated domains of Mammalian genomes PLoS Genet. 2014 Feb; 10(2):e1004143

Gurbuz I, Ferralli J, Roloff T, Chiquet-Ehrismann R, Asparuhova MB SAP domain-dependent Mkl1 signaling stimulates proliferation and cell migration by induction of a distinct gene set indicative of poor prognosis in breast cancer patients Mol Cancer. 2014 Feb; 13(1):22

Hisano M, Erkek S, Dessus-Babus S, Ramos L, Stadler MB, Peters AH Genome-wide chromatin analysis in mature mouse and human spermatozoa Nat Protoc. 2013 Dec; 8(12):2449-70

Gattelli A, Nalvarte I, Boulay A, Roloff TC, Schreiber M, Carragher N, Macleod KK, Schlederer M, Lienhard S, Kenner L, Torres-Arzayus MI, Hynes NE Ret inhibition decreases growth and metastatic potential of estrogen receptor positive breast cancer cells EMBO Mol Med. 2013 Sep; 5(9):1335-50

Meier-Abt F, Milani E, Roloff T, Brinkhaus H, Duss S, Meyer DS, Klebba I, Balwierz PJ, van Nimwegen E, Bentires-Alj M Parity induces differentiation and reduces Wnt/Notch signaling ratio and proliferation potential of basal stem/progenitor cells isolated from mouse mammary epithelium Breast Cancer Res. 2013 Apr; 15(2):R36

Yokobayashi S, Liang CY, Kohler H, Nestorov P, Liu Z, Vidal M, van Lohuizen M, Roloff TC, Peters AH PRC1 coordinates timing of sexual differentiation of female primordial germ cells Nature. 2013 Mar; 495(7440):236-40

Aceto N, Duss S, Macdonald G, Meyer DS, Roloff TC, Hynes NE, Bentires-Alj M Co-expression of HER2 and HER3 receptor tyrosine kinases enhances invasion of breast cells via stimulation of interleukin-8 autocrine secretion Breast Cancer Res. 2012 Oct; 14(5):R131

Kueng S, Tsai-Pflugfelder M, Oppikofer M, Ferreira HC, Roberts E, Tsai C, Roloff TC, Sack R, Gasser SM Regulating repression: roles for the sir4 N-terminus in linker DNA protection and stabilization of epigenetic States PLoS Genet. 2012 May; 8(5):e1002727

Posfai E, Kunzmann R, Brochard V, Salvaing J, Cabuy E, Roloff TC, Liu Z, Tardat M, van Lohuizen M, Vidal M, Beaujean N, Peters AH Polycomb function during oogenesis is required for mouse embryonic development Genes Dev. 2012 May; 26(9):920-32

Lienert F, Mohn F, Tiwari VK, Baubec T, Roloff TC, Gaidatzis D, Stadler MB, Schübeler D Genomic Prevalence of Heterochromatic H3K9me2 and Transcription Do Not Discriminate Pluripotent from Terminally Differentiated Cells PLoS Genet. 2011 Jun;7(6):e1002090.

Bell O, Schwaiger M, Oakeley EJ, Lienert F, Beisel C, Stadler MB, Schübeler D Accessibility of the Drosophila genome discriminates PcG repression, H4K16 acetylation and replication timing Nat Struct Mol Biol. 2010 Jul; 17(7):894-900

Brykczynska U, Hisano M, Erkek S, Ramos L, Oakeley EJ, Roloff TC, Beisel C, Schübeler D, Stadler MB, Peters AH Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa Nat Struct Mol Biol. 2010 Jun;17(6):679-87.

Schwaiger M, Kohler H, Oakeley EJ, Stadler MB, Schübeler D Heterochromatin protein 1 (HP1) modulates replication timing of the Drosophila genome Genome Res. 2010 Jun;20(6):771-80.

Dey JH, Bianchi F, Voshol J, Bonenfant D, Oakeley EJ, Hynes NE Targeting fibroblast growth factor receptors blocks PI3K/AKT signaling, induces apoptosis, and impairs mammary tumor outgrowth and metastasis Cancer Res. 2010 May 15;70(10):4151-62.

Tomovic A, Stadler M, Oakeley EJ Transcription factor site dependencies in human, mouse and rat genomes BMC Bioinformatics. 2009 Oct 16;10(1):339.

Hadziselimovic F, Hadziselimovic NO, Demougin P, Krey G, Hoecht B, Oakeley EJ EGR4 Is a Master Gene Responsible for Fertility in Cryptorchidism Sex Dev. 2009;3(5):253-63.

Schwaiger M, Stadler MB, Bell O, Kohler H, Oakeley EJ, Schübeler D Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome Genes Dev. 2009 Mar; 23(5):589-601

Tomovic A, Oakeley EJ Computational structural analysis: multiple proteins bound to DNA PLoS ONE. 2008 Sep 19;3(9):e3243.

Tomovic A, Oakeley EJ Quality estimation of multiple sequence alignments by Bayesian hypothesis testing Bioinformatics. 2007 Sep 15;23(18):2488-90.

About this site2018 © FMI Basel Switzerland