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Publications


Ostapcuk V, Mohn F, Carl SH, Basters A, Hess D, Iesmantavicius V, Lampersberger L, Flemr M, Pandey A, Thomä NH, Betschinger J, Bühler M Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes Nature. 2018 May; 557(7707):739-743

Kumari P, Aeschimann F, Gaidatzis D, Keusch JJ, Ghosh P, Neagu A, Pachulska-Wieczorek K, Bujnicki JM, Gut H, Großhans H, Ciosk R Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition Nat Commun. 2018 Apr 19;9(1):1549. 2018 Apr; 91:1549

Fassnacht C, Tocchini C, Kumari P, Gaidatzis D, Stadler MB, Ciosk R The CSR-1 endogenous RNAi pathway ensures accurate transcriptional reprogramming during the oocyte-to-embryo transition in Caenorhabditis elegans PLoS Genet. 2018 Mar; 14(3):e1007252

Knuckles P, Lence T, Haussmann IU, Jacob D, Kreim N, Carl SH, Masiello I, Hares T, Villaseñor R, Hess D, Andrade-Navarro MA, Biggiogera M, Helm M, Soller M, Bühler M, Roignant JY Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA-binding factor Rbm15/Spenito to the m6A machinery component Wtap/Fl(2)d Genes Dev. 2018 Mar; 32(5-6):415-429

Moncayo G, Grzmil M, Smirnova T, Zmarz P, Huber RM, Hynx D, Kohler H, Wang Y, Hotz HR, Hynes NE, Keller G, Frank S, Merlo A, Hemmings BA SYK Inhibition Blocks Proliferation and Migration of Glioma Cells, and Modifies the Tumor Microenvironment Neuro Oncol. 2018 Feb; [Epub ahead of print]

Daum JM, Keles Ö, Holwerda SJB, Kohler H, Rijli FM, Stadler M, Roska B The formation of the light-sensing compartment of cone photoreceptors coincides with a transcriptional switch Elife. 2017 Nov; 6

Horvathova I, Voigt F, Kotrys AV, Zhan Y, Artus-Revel CG, Eglinger J, Stadler MB, Giorgetti L, Chao JA The Dynamics of mRNA Turnover Revealed by Single-Molecule Imaging in Single Cells Mol Cell. 2017 Nov; 68(3):615-625

Miki TS, Carl SH, Großhans H Two distinct transcription termination modes dictated by promoters Genes Dev. 2017 Sep; 31(18):1870-1879

Hadziselimovic F, Gegenschatz-Schmid K, Verkauskas G, Demougin P, Bilius V, Dasevicius D, Stadler MB Genes Involved in Long-Term Memory Are Expressed in Testis of Cryptorchid Boys and Respond to GnRHa Treatment Cytogenet Genome Res. 2017 Aug; 152(1):9-15

Krebs AR, Imanci D, Hoerner L, Gaidatzis D, Burger L, Schübeler D Genome-wide Single-Molecule Footprinting Reveals High RNA Polymerase II Turnover at Paused Promoters Mol Cell. 2017 Aug; 67(3):411-422

Hadziselimovic F, Gegenschatz-Schmid K, Verkauskas G, Demougin P, Bilius V, Dasevicius D, Stadler MB GnRHa Treatment of Cryptorchid Boys Affects Genes Involved in Hormonal Control of the HPG Axis and Fertility Sex Dev. 2017 Jul; 11(3):126-136

Knuckles P, Carl SH, Musheev M, Niehrs C, Wenger A, Bühler M RNA fate determination through cotranscriptional adenosine methylation and microprocessor binding Nat Struct Mol Biol. 2017 Jul; 24(7):561-569

Minoux M, Holwerda S, Vitobello A, Kitazawa T, Kohler H, Stadler MB, Rijli FM Gene bivalency at Polycomb domains regulates cranial neural crest positional identity Science. 2017 Mar; 355:6332

Zhan Y, Mariani L, Barozzi I, Schulz EG, Bluthgen N, Stadler M, Tiana G, Giorgetti L Reciprocal insulation analysis of Hi-C data shows that TADs represent a functionally but not structurally privileged scale in the hierarchical folding of chromosomes Genome Res. 2017 Mar; 27(3):479-490

Aeschimann F, Kumari P, Bartake H, Gaidatzis D, Xu L, Ciosk R, Großhans H LIN41 Post-transcriptionally Silences mRNAs by Two Distinct and Position-Dependent Mechanisms Mol Cell. 2017 Feb; 65(3):476-489

Britschgi A, Duss S, Kim S, Couto JP, Brinkhaus H, Koren S, De Silva D, Mertz KD, Kaup D, Varga Z, Voshol H, Vissieres A, Leroy C, Roloff T, Stadler MB, Scheel CH, Miraglia LJ, Orth AP, Bonamy GM, Reddy VA, Bentires-Alj M The Hippo kinases LATS1 and 2 control human breast cell fate via crosstalk with ERa Nature. 2017 Jan; 541(7638):541-545

Habacher C, Guo Y, Venz R, Kumari P, Neagu A, Gaidatzis D, Harvald EB, Færgeman NJ, Gut H, Ciosk R Ribonuclease-Mediated Control of Body Fat Dev Cell. 2016 Nov; 39(3):359-369

Miki TS, Carl SH, Stadler MB, Großhans H XRN2 Autoregulation and Control of Polycistronic Gene Expresssion in Caenorhabditis elegans PLoS Genet. 2016 Sep; 12(9):e1006313

Hadziselimovic F, Gegenschatz-Schmid K, Verkauskas G, Docampo-Garcia MJ, Demougin P, Bilius V, Malcius D, Dasevicius D, Stadtler MB Gene Expression Changes Underlying Idiopathic Central Hypogonadism in Cryptorchidism with Defective Mini-Puberty Sex Dev. 2016 Sep; 10(3) :136-46

Eymery A, Liu Z, Ozonov EA, Stadler MB, Peters AH The methyltransferase Setdb1 is essential for meiosis and mitosis in mouse oocytes and early embryos Development. 2016 Aug; 143(15):2767-79

Royo H, Stadler MB, Peters AH Alternative Computational Analysis Shows No Evidence for Nucleosome Enrichment at Repetitive Sequences in Mammalian Spermatozoa Dev Cell. 2016 Apr; 37(1):98-104

Domcke S, Bardet AF, Adrian Ginno P, Hartl D, Burger L, Schübeler D Competition between DNA methylation and transcription factors determines binding of NRF1 Nature. 2015 Dec; 528(7583):575-9

Gonzalez-Sandoval A, Towbin BD, Kalck V, Cabianca DS, Gaidatzis D, Hauer MH, Geng L, Wang L, Yang T, Wang X, Zhao K, Gasser SM Perinuclear Anchoring of H3K9-Methylated Chromatin Stabilizes Induced Cell Fate in C. elegans Embryos Cell. 2015 Dec; 163(6):1333-47

Royo H, Seitz H, ElInati E, Peters AH, Stadler MB, Turner JM Silencing of X-Linked MicroRNAs by Meiotic Sex Chromosome Inactivation PLoS Genet. 2015 Oct; 11(10):e1005461

Choukrallah MA, Song S, Rolink AG, Burger L, Matthias P Enhancer repertoires are reshaped independently of early priming and heterochromatin dynamics during B cell differentiation Nat Commun. 2015 Oct; 6:8324

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