Pumo G, Rijli FM (2025) Chromatin regulation of neuronal activity-dependent gene programs in circuit formation and plasticity

Anibal-Martinez M, Puche-Aroca L, Pérez-Montoyo E, Pumo G, Madrigal MP, Rodriguez-Malmierca LM, Martini FJ, Rijli FM, Lopez-Bendito G (2025) A prenatal window for enhancing spatial resolution of cortical barrel maps.

Cui K, Xia Y, Patnaik A, Salivara A, Lowenstein ED, Isik EG, Knorz AL, Airaghi L, Crotti M, Garratt AN, Meng F, Schmitz D, Studer M, Rijli FM, Nothwang HG, Rost BR, Strauss U, Hernandez-Miranda LR. (2024) Genetic identification of medullary neurons underlying congenital hypoventilation.

Kessler S, Minoux M, Joshi O, Ben Zouari Y, Ducret S, Ross F, Vilain N, Salvi A, Wolff J, Kohler H, Stadler MB, Rijli FM (2023) A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest

Selleri L, Rijli FM (2023) Shaping faces: genetic and epigenetic control of craniofacial morphogenesis

Pumo GM, Kitazawa T, Rijli FM (2022) Epigenetic and Transcriptional Regulation of Spontaneous and Sensory Activity Dependent Programs During Neuronal Circuit Development

Genescu I, Anibal-Martinez M, Kouskoff V, Chenouard N, Mailhes-Hamon C, Cartonnet H, Lokmane L, Rijli FM, López-Bendito G, Gambino F, Garel S (2022) Dynamic interplay between thalamic activity and Cajal-Retzius cells regulates the wiring of cortical layer 1

Kitazawa T, Minoux M, Ducret S, Rijli FM (2022) Different Ectopic Hoxa2 Expression Levels in Mouse Cranial Neural Crest Cells Result in Distinct Craniofacial Anomalies and Homeotic Phenotypes

Machlab D, Burger L, Soneson C, Rijli FM, Schübeler D, Stadler MB (2022) monaLisa: an R/Bioconductor package for identifying regulatory motifs

Taro Kitazawa, Dania Machlab, Onkar Joshi, Nicola Maiorano, Hubertus Kohler, Sebastien Ducret, Sandra Kessler, Henrik Gezelius, Charlotte Soneson, Panagiotis Papasaikas, Guillermina Lopez-Bendito, Michael B. Stadler and Filippo M. Rijli (2021) A unique bipartite Polycomb signature regulates stimulus-response transcription during development

Maheshwari U, Kraus D, Vilain N, Holwerda SJB, Cankovic V, Maiorano NA, Kohler H, Satoh D, Sigrist M, Arber S, Kratochwil CF, Di Meglio T, Ducret S, Rijli FM (2020) Postmitotic Hoxa5 Expression Specifies Pontine Neuron Positional Identity and Input Connectivity of Cortical Afferent Subsets.

Riva M, Genescu I, Habermacher C, Orduz D, Ledonne F, Rijli FM, Lopez-Bendito G, Coppola E, Garel S, Angulo MC, Pierani A. (2019) Activity-dependent death of transient Cajal-Retzius neurons is required for functional cortical wiring.

Coughlan E, Garside VC, Wong SFL, Liang H, Kraus D, Karmakar K, Maheshwari U, Rijli FM, Bourne J, McGlinn E. (2019) A Hox Code Defines Spinocerebellar Neuron Subtype Regionalization.

Kitazawa T, Rijli FM (2018) Barrelette map formation in the prenatal mouse brainstem

Kitazawa T, Rijli FM (2018) Integrating into the Rhombomere Community across the Border

Kitazawa T, Rijli FM (2017) Nuclear pore protein meets transcription factor in neural fate

Minoux M, Holwerda S, Vitobello A, Kitazawa T, Kohler H, Stadler M, Rijli FM (2017) Gene bivalency at polycomb domains regulates cranial neural crest positional identity

Karmakar K, Narita Y, Fadok J, Loche A, Fadok J, Genoud C, Ducret S, Di Meglio T, Thierry R, Bacelo J, Lüthi A, Rijli FM (2017) Hoxa2 and Hoxb2 are required for tonotopic map precision and sound discrimination in the mouse auditory brainstem

Moreno-Juan V, Filipchuk A, Antón-Bolaños N, Mezzera C, Gezelius H, Andrés B, Rodriguez Malmierca L, Susín R, Schaad O, Rutlin M, Nelson S, Ducret S, Valdeolmillos M, Rijli FM, López-Bendito G (2017) Prenatal thalamic waves regulate cortical area size prior to sensory processing

Bechara A, Laumonnerie C, Vilain N, Kratochwil CF, Cankovic V, Maiorano NA, Kirschmann MA, Ducret S, Rijli FM (2015) Hoxa2 selects barrelette neuron identity and connectivity in the mouse somatosensory brainstem

Laumonnerie C*, Bechara A*, Vilain N, Kurihara Y, Kurihara H, Rijli FM (2015) Facial whisker pattern is not sufficient to instruct a whisker-related topographic map in the mouse somatosensory brainstem.

Minoux M, Kratochwil CF, Ducret S, Amin S, Kitazawa T, Kurihara H, Bobola N, Vilain N, Rijli FM (2013) Mouse Hoxa2 mutations provide a model for microtia and auricle duplication

Di Bonito M, Narita Y, Avallone B, Sequino L, Mancuso M, Andolfi G, Franzè AM, Puelles L, Rijli FM*, Studer M* (2013) Assembly of the auditory circuitry by a hox genetic network in the mouse brainstem

Di Meglio T, Kratochwil CF, Vilain N, Loche A, Vitobello A, Yonehara K, Hrycaj SM, Roska B, Peters AHFM, Eichmann A, Wellik D, Ducret S, Rijli FM (2013) Ezh2 orchestrates topographic tangential migration and connectivity of mouse precerebellar neurons

Vitobello A, Ferretti E, Lampe X, Vilain N, Ducret S, Ori M, Spetz JF, Selleri L, Rijli FM (2011) Hox and Pbx factors control retinoic acid synthesis during hindbrain segmentation

Erzurumlu RS, Murakami Y, Rijli FM (2010) Mapping the face in the somatosensory brainstem

Minoux M, Rijli FM (2010) Molecular mechanisms of cranial neural crest cell migration and patterning in craniofacial development

Minoux M, Antonarakis GS, Kmita M, Duboule D, Rijli FM (2009) Rostral and caudal pharyngeal arches share a common neural crest ground pattern

Geisen MJ, Di Meglio T, Pasqualetti M, Ducret S, Brunet JF, Chedotal A, Rijli FM (2008) Hox paralogue group 2 genes control the migration of mouse pontine neurons through slit-robo signaling

Oury F, Murakami Y, Renaud JS, Pasqualetti M, Charnay P, Ren SY, Rijli FM (2006) Hoxa2- and rhombomere-dependent development of the mouse facial somatosensory map